CDS
| Accession Number | TCMCG006C48801 |
| gbkey | CDS |
| Protein Id | XP_013733399.1 |
| Location | join(2069..2299,2372..2471,2531..2684,3055..3205,3283..3431,3548..3648,3737..3894,3990..4104,4196..4524) |
| Gene | LOC106437004 |
| GeneID | 106437004 |
| Organism | Brassica napus |
Protein
| Length | 495aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013877945.2 |
| Definition | signal recognition particle 54 kDa protein 3-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) |
| KEGG_TC | 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 |
| KEGG_Module |
M00335
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko02044 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03106
[VIEW IN KEGG] |
| EC |
3.6.5.4
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko02024
[VIEW IN KEGG] ko03060 [VIEW IN KEGG] ko03070 [VIEW IN KEGG] map02024 [VIEW IN KEGG] map03060 [VIEW IN KEGG] map03070 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGTTTTAGCGGAGCTGGGCGGGCAGATCGCCAGCGCCTTACAGAAGATGAGCAATGTGACGATTATCGACGAGAAGGCTCTGAACGAATGCTTGAAAGAGATCACTCGCGCCCTTCTCCACTCCGATGTTTCTTTCCCCCTTGTGAGGGAGATGCAGAACAACATCAAGAAGATCGTCAACCTCGAGGAGCTAGCTGCTGGTCACAACAAGCGACGCATCATTGAACAAGCGATATTTAGTGAACTGTGTAAGATGTTGGATCCAGGGAAGCCTGCATTTGCGCCCAAGAAGGCTAAACCTAGTGTAGTTATGTTCGTGGGGTTACAAGGTGCTGGTAAGACCACAACGTGTACCAAGTATGCTTATTACCATCAGAAGAAAGGGTACAAGCCGGCTCTGGTGTGTGCGGATACTTTCAGGGCTGGTGCTTTTGATCAGCTGAAACAGAATGCCACCAAGGCTAGGATCCCCTTTTATGGAAGCTACACGGAATCTGATCCTGTGAAAATTGCTGTTGAGGGAGTTGATACGTTTAAGAAAGAAAACTGTGATCTTATTATTGTCGACACCAGTGGACGCCATAAACAAGAAGCTACTCTCTTTGAAGAAATGCGTCAAGTTGCTGAAGCAACGAAACCAGATCTTGTTATATTTGTCATGGACAGCAGTATTGGTCAAGCTGCATTTGACCAAGCTCAAGCATTTAAGCAAAGTGTTGCCGTGGGAGCTGTGATTATCACTAAGATGGATGGCCATGCCAAGGGTGGTGGTGCTCTTAGCGCTGTTGCAGCTACAAAGAGTCCTGTGATATTCATCGGAACAGGAGAGCATATGGATGAGTTTGAAGTGTTTGACGTCAAACCATTTGTCAGCCGTCTCTTAGGAATGGGTGATTGGTCTGGATTCGTGGATAAACTACAAGATGTGGTACCTAAAAATCAACAGCCTGAACTTCTGGAAAAGCTCTCTCAGGGTACCTTCACATTGAGAATTATGTACGACCAGTTCCAGAACATACTGAACATGGGGCCACTGAAGGAGGTTTTCTCAATGCTTCCTGGAGGTGCTGCTGATATGATGCCGAAAGGACATGAGAAAGAAAGCCAAGCCAAGGTAAAGCGATACATGACAATGATGGATTCTATGACAAACGAAGAACTGGACAGCTCGAACCCGAAGGTGTTTAACGAGTCAAGGATGATGAGGATAGCGAGAGGGTCAGGGAGGCTTGTAAGAGAAGTGATGGAGATGTTGGAAGAGTACAAGAGGCTAGCAAAGATATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAGTGGAGACATGAGCGCACTCTCGAGAAACATGAACGCTCAGCACATGAGCAAGGTCCTCCCTCCTCAGATGCTCAAGCAGATTGGTGGCATGGGTGGTCTACAAAGTCTCATGAAACAGATGGGCTCCGGCAAGGATATGATGGGAATGTTCGGCGGCAAAGACAAGTAG |
| Protein: MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIVNLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKNQQPELLEKLSQGTFTLRIMYDQFQNILNMGPLKEVFSMLPGGAADMMPKGHEKESQAKVKRYMTMMDSMTNEELDSSNPKVFNESRMMRIARGSGRLVREVMEMLEEYKRLAKIWSKMKGLKIPKSGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGKDK |